Skip to main content

Table 2 Expression of potential candidate genes in organs and cells of uninfected mice

From: A novel locus on mouse chromosome 7 that influences survival after infection with tick-borne encephalitis virus

Gene symbol

Cd33

Siglece

Klk1b22

Klk1b16

Fut2

Grwd1

Abcc6

Otog

Mkrn3

Gene ID: MGI

99,440

1,932,475

95,291

891,982

109,374

2,141,989

1,351,634

1,202,064

2,181,178

Gene ID: NCBI

12,489

83,382

13,646

16,615

14,344

101,612

27,421

18,419

22,652

Median

5.2

4.7

4.6

4.6

4.9

163

4.6

4.95

4.8

Organs

 Bone

77.05

> 10M

20.82

> 3M

4.64

~ M

4.64

~ M

4.86

~ M

86.89

<M

4.64

~ M

4.95

~ M

4.64

~ M

 Bone marrow

114.05

> 10M

51.63

> 10M

4.64

~ M

4.64

~ M

4.88

~ M

106.44

~ M

4.64

~ M

4.79

~ M

4.66

~ M

Brain

 Amygdala

4.97

~ M

4.67

~ M

4.64

~ M

4.64

~ M

4.86

~ M

73.20

<M

4.64

~ M

4.95

~ M

4.81

~ M

 Cerebellum

4.91

~ M

4.76

~ M

5.24

~ M

5.64

~ M

5.39

~ M

26.75

<M

4.64

~ M

4.94

~ M

5.86

~ M

 Cerebral cortex

4.91

~ M

4.67

~ M

4.64

~ M

4.64

~ M

4.90

~ M

93.30

<M

4.64

~ M

4.94

~ M

4.64

~ M

 Hippocampus

4.91

~ M

4.67

~ M

4.64

~ M

4.64

~ M

4.86

~ M

51.91

<M

4.64

~ M

4.95

~ M

4.76

~ M

 Olfactory bulb

4.89

~ M

4.67

~ M

4.64

~ M

4.67

~ M

4.86

~ M

38.09

<M

4.64

~ M

4.95

~ M

19.91

> 3M

Eye

 Eyecup

13.71

~ 3M

4.67

~ M

6.64

> M

4.64

~ M

5.80

~ M

180.25

~ M

4.64

~ M

4.95

~ M

7.49

> M

 Lens

9.26

> M

6.18

~ M

4.64

~ M

7.54

> M

5.80

~ M

392.8

> M

56.53

~ 10M

4.95

~ M

13.36

> M

 Retina

5.72

~ M

4.67

~ M

4.74

~ M

4.64

~ M

4.86

~ M

147.73

<M

4.64

~ M

4.95

~ M

38.78

~ 10M

 Intestine large

4.86

<M

4.67

~ M

486.82

 30M

6.13

> M

91.36

> 3M

62.6

<M

4.64

~ M

4.94

~ M

4.64

~ M

 Intestine small

4.91

~ M

4.68

~ M

35.44

> 3M

4.66

~ M

6.45

~ M

128.54

~ M

5.80

> M

4.95

~ M

4.64

~ M

 Kidney

4.87

~ M

4.67

~ M

607.67

> 30M

15.57

~ 3M

10.44

> M

80.87

<M

4.64

~ M

4.95

~ M

4.64

~ M

 Lacrimal gland

4.92

~ M

4.67

~ M

541.25

> 30M

187.21

> 30M

15.28

> M

286.48

> 3M

4.64

~ M

4.95

~ M

4.64

~ M

 Liver

4.89

~ M

5.09

~ M

4.64

~ M

6.14

> M

4.86

~ M

161.71

~ M

920.68

 30M

4.95

~ M

4.64

~ M

 Lymph nodes

85.8

> 3M

4.68

~ M

4.64

~ M

4.64

~ M

4.99

~ M

97.85

<M

4.64

~ M

4.95

~ M

4.64

~ M

 Pancreas

7.40

~ M

5.15

~ M

1806.5

> 30M

22.47

> 3M

10.44

> M

25.91

~ M

4.64

~ M

9.28

> M

4.64

~ M

 Pituitary

4.89

~ M

4.67

~ M

13.10

~ 3M

114.09

~ 30M

7.07

> M

61.18

<M

4.64

~ M

4.95

~ M

4.64

~ M

 Prostate

5.25

~ M

4.75

~ M

4.64

~ M

4.66

~ M

42.15

> 3M

48.62

<M

4.64

~ M

4.95

~ M

4.64

~ M

 Salivary gland

5.62

~ M

4.67

~ M

36,542.06

> 1000M

26,974.63

> 1000M

5.95

~ M

189.83

~ M

4.64

~ M

4.99

~ M

5.25

~ M

 Spleen

15.39

~ 3M

9.02

> M

13.11

~ 3M

4.64

~ M

4.91

~ M

122.09

<M

4.64

~ M

4.95

~ M

4.81

~ M

 Stomach

4.89

~ M

4.65

~ M

81.39

> 10M

4.64

~ M

117.61

> 10M

73.50

<M

4.64

~ M

4.95

~ M

4.64

~ M

 Testis

5.40

~ M

4.67

~ M

567.00

> 30M

30.89

> 3M

16.28

~ 3M

86.24

<M

10.55

> M

4.95

~ M

6.04

~ M

Uterus

4.91

~ M

4.67

~ M

4.64

~ M

4.64

~ M

222.61

> 30M

131.6

<M

4.64

~ M

4.95

~ M

5.84

~ M

Cells

 B cells_marginal_zone

25.26

> 3M

4.67

~ M

4.97

~ M

4.64

~ M

4.86

~ M

446.31

~ 3M

4.64

~ M

4.95

~ M

4.64

~ M

 Common myeloid progenitor

11.3

> M

6.18

~ M

5.77

~ M

5.05

~ M

5.20

~ M

1192.34

> 3M

4.64

~ M

5.91

~ M

4.64

~ M

 Dendritic lymphoid cells

9.83

> M

4.67

~ M

4.64

~ M

4.64

~ M

4.86

~ M

369.07

> M

4.64

~ M

5.11

~ M

4.64

~ M

 Dendritic cells myeloid CD8a−

77.51

> 10M

4.96

~ M

4.64

~ M

4.64

~ M

4.86

~ M

299.19

> M

4.64

~ M

4.95

~ M

4.64

~ M

 Dendritic plasmacytoid B220+

140.59

~ 30M

4.74

~ M

88.52

> 10M

4.64

~ M

4.86

~ M

238.95

> M

4.64

~ M

5.14

~ M

4.64

~ M

 Granul ocytes mac1 + gr1+

651.27

> 30M

6.87

> M

4.64

~ M

4.64

~ M

5.04

~ M

53.79

<M

4.64

~ M

4.95

~ M

4.64

~ M

 Hematopoietic stem cells

42.14

> 3M

4.8

~ M

4.96

~ M

4.64

~ M

6.41

> M

1445.80

~ 10M

4.64

~ M

4.95

~ M

5.19

~ M

 Macrophage_bone_marrow

11.64

> M

14.68

> 3M

4.64

~ M

4.64

~ M

4.86

~ M

308.83

> M

4.64

~ M

4.95

~ M

4.64

~ M

 Mast cells

214.54

> M

4.67

~ M

4.64

~ M

4.64

~ M

4.83

~ M

55.07

<M

4.64

~ M

4.95

~ M

4.64

~ M

 Mega_erythrocyte progenitor

5.31

~ M

4.67

~ M

7.57

> M

4.64

~ M

6.47

> M

2842.61

> 10M

4.64

~ M

8.07

> M

4.64

~ M

 Microglia

99.81

> 10M

79.64

> 10M

4.64

~ M

4.64

~ M

4.86

~ M

269.08

> M

4.64

~ M

4.95

~ M

4.64

~ M

 Osteoclasts

363.46

> 30M

4.77

~ M

7.67

> M

4.64

~ M

4.99

~ M

327.07

> M

4.64

~ M

5.31

~ M

4.64

~ M

 T-cellsCD4+

4.91

~ M

5.00

~ M

7.57

> M

4.82

~ M

4.86

~ M

621.74

> 3M

4.64

~ M

5.06

~ M

4.64

~ M

 T-cellsCD8+

4.91

~ M

4.67

~ M

13.55

~ 3M

4.64

~ M

5.29

~ M

715.19

> 3M

4.64

~ M

6.13

> M

4.64

~ M

 T-cells FoxP3+

25.67

> 3M

4.67

~ M

4.64

~ M

4.96

~ M

4.93

~ M

584.63

~ 3M

4.64

~ M

4.95

~ M

4.64

~ M

  1. Data were compiled from public database BioGps (http://biogps.org) May 6, 2018. First column: relative units; second column: relationship to median (M); M = median value across all samples for a single probe set