- Poster presentation
- Open Access
Spatiotemporal dynamics in spiking simulations of superior colliculus fit via MCMC suggest disinhibition responsible for superlinear summation
BMC Neuroscience volume 16, Article number: P293 (2015)
The superior colliculus (SC) is a midbrain region with visually responsive neurons in the superficial layers and eye movement controlling neurons in the deeper layers. Recently,  performed in vitro experiments to elucidate lateral interactions within horizontal slices of the SC (Figure 1A). The experiments indicate that the superficial (visual) layers implement surround inhibition, and furthermore that strong stimulation at two adjacent locations (separation ~150 μm) produces an unexpected super-linear summation that is not seen in the deeper layers (Figure 1B, a+b). We used differential evolution Markov-chain Monte Carlo (MCMC) to estimate the parameters of a large-scale spiking neural circuit simulation to fit the slice data . The model contains populations of inhibitory and excitatory neurons as well as input axons from retina/cortex. We included free anatomical (dendrite/axon spread) and dynamic (short-term synaptic plasticity) hyper-parameters in the model, and used MCMC estimate the posterior distribution of parameters that is most likely given the slice data. The resulting marginal distributions show promising agreement with verifiable anatomical parameters such as the lateral spread of dendrites and axons of the inhibitory and excitatory neuron populations in the superficial colliculus, even though no such constraints were coded into the model . However, the posterior distributions for non-intuitive parameters (such as synaptic efficacies and facilitation/depression time constants) cannot be verified directly with existing data. Furthermore, it is not clear what the role of the dynamical parameters is in producing the behavior of the best-fit models, for example the local superlinearity described above. In this work, we take the additional step of analyzing the spatio-temporal dynamics of one of the best-fit regions of parameter space found via MCMC. The purpose is to provide a mechanistic explanation for the super-linear summation observed during two-point stimulation. Figure 1D shows the difference in spatio-temporal dynamics between actual two-point stimulation versus the linear sum of two independent stimulations. Thus, positive values indicate an increase in conductance sent to neurons at the horizontal axis position, arriving from neurons at the position indicated by the vertical axis (as explained in 1C). 16 ms from stimulation onset, there is a large increase in flow of inhibitory input from near the center of the circuit to inhibitory neurons all around the circuit, thus disinhibiting the circuit. 5 ms later, the excitatory neurons near the center receive input from excitatory neurons near the middle (i.e. recurrent activity), suggesting that cause for the super-linearity.
Phongphanphanee P Marino RA, Kaneda K, Yanagawa Y, Munoz DP, Isa T: Distinct local circuit properties of the superficial and intermediate layers of the rodent superior colliculus. Eur J Neurosci. 2014, 40: 2329-2343.
Veale R, Isa T, Yoshida M: Applying Differential Evolution MCMC to Parameterize Large-scale Spiking Neural Simulations. Proc. IEEE CEC. 2015
RV is funded by JSPS (PE14009). TI funded by MEXT (26221003), JSPS KAKENHI (13350518). MY funded by a JST/DFG/BMBF collaborative project in Computational Neuroscience (12800297).
About this article
Cite this article
Veale, R., Isa, T. & Yoshida, M. Spatiotemporal dynamics in spiking simulations of superior colliculus fit via MCMC suggest disinhibition responsible for superlinear summation. BMC Neurosci 16 (Suppl 1), P293 (2015). https://doi.org/10.1186/1471-2202-16-S1-P293
- Posterior Distribution
- Differential Evolution
- Superior Colliculus
- Lateral Spread
- Excitatory Neuron