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Pattern formation in a mean field model of electrocortical activity
BMC Neuroscience volume 14, Article number: P149 (2013)
Mean field models of cortical activity describe the electrical potentials and interactions of cortical neuron populations, coarse-grained over the scale of a few macro columns. Such models can be analysed as dynamical systems, in particular as time-dependent partial differential or integro-differential equations, which may have complicating aspects such as explicit time delays and stochastic terms. We analyse a model of intermediate complexity, formulated by Liley et al. . This model describes an excitatory and an inhibitory population in a simple geometry, on which the effect of long-range connections is represented by a damped wave equations.
Although somewhat rudimentary from a physiological point of view, this model has been shown to predict several features of electrocortical dynamics rather well (see, e.g., [2, 3] and refs therein) and is challenging to analyse mathematically. It consists of fourteen coupled partial differential equations with strong nonlinearities.
Where previous analysis on this model, and similar mean-field models, has used drastic simplifications, such as reduction to zero or one spatial dimensions or a single population, we developed tools for parsing the dynamics of the full-fledged equations . Using the open-source library PETSc , we have implemented fully implicit time-stepping for the field equations and the tangent linear model, as well as arclength continuation for equilibrium and time-periodic solutions. All computations are performed in parallel using domain decomposition.
In the current application of these tools, we focus on physiologically interesting γ-range activity . This activity is triggered by a Hopf bifurcation under small variations of the local inhibitory to inhibitory connection density. We computed the saddle-type periodic orbit that regulates the transient dynamics of perturbations to the base equilibrium state. Two snap shots of this orbit, computed on a 12.8 by 12.8 cm domain, with 0.5 mm resolution, are shown in Figure 1. The period of this orbit corresponds to a 12 Hz oscillation, whereas the final, attracting, state has a strong 40 Hz peak in the power spectrum .
In ongoing work we are investigating bifurcations of this periodic orbit, which can turn completely stable or give rise to more complicated solutions, such as quasi-periodic or chaotic. This dynamical systems approach to the analysis of mean-field models should give us more insight in the complex model behaviour.
Liley DTJ, Cadusch PJ, Dafilis MP: A spatially continuous mean field theory of electrocortical activity. Network: comput Neural syst. 2002, 13: 67-113.
Coombes S: Large-scale neural dynamics: Simple and complex. NeuroImage. 2010, 52: 731-739. 10.1016/j.neuroimage.2010.01.045.
Bojak I, Liley DTJ: Self-organized 40 Hz synchronization in a physiological theory of EEG. Neurocomput. 2007, 70: 2085-2090. 10.1016/j.neucom.2006.10.087.
Green KR, van Veen L: Open-source tools for dynamical analysis of Liley's mean-field cortex model. arXiv:1210.4784
Balay S, et al: PETSc users manual. Argonne National Laboratory. ANL-25/11R3.2, [http://www.mcs.anl.gov/petsc]
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Veen, L.v., Green, K. Pattern formation in a mean field model of electrocortical activity. BMC Neurosci 14, P149 (2013). https://doi.org/10.1186/1471-2202-14-S1-P149
- Periodic Orbit
- Hopf Bifurcation
- Dynamical System Approach
- Damp Wave Equation
- Snap Shot