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Table 3 Gene enrichment GO Biological Process analysis of the significantly downregulated genes

From: Prodromal Parkinson disease signs are predicted by a whole-blood inflammatory transcriptional signature in young Pink1−/− rats

GO biological processes 2021

P-value

Combined score

Genes

Positive regulation of purine nucleotide biosynthetic process (GO:1900373)

5.27E−05

2384.526542

PINK1;NOS2

Negative regulation of neuron apoptotic process (GO:0043524)

0.001632573

246.9566012

PINK1;LIG4

Innate immune response (GO:0045087)

0.001981189

87.80293162

NOS2;LCN2;MID2

Positive regulation of autophagy (GO:0010508)

0.00260634

179.3506662

PINK1;MID2

Positive regulation of cold-induced thermogenesis (GO:0120162)

0.003019429

161.9703169

ACADL;LCN2

Regulation of neuron apoptotic process (GO:0043523)

0.003080796

159.7193234

PINK1;LIG4

Negative regulation of neuron death (GO:1901215)

0.003080796

159.7193234

PINK1;LIG4

Positive regulation of metabolic process (GO:0009893)

0.004071108

131.3781523

ACADL;LCN2

  1. ACADL, Acyl-CoA Dehydrogenase Long Chain; LCN2, Lipocalin 2; LIG4, DNA Ligase 4; MID2, Midline 2; NOS2, Nitric Oxide Synthase 2; Pink1, PTEN-induced kinase 1