Skip to main content

Table 1 Identities of thalamic axonal mRNAs.

From: The expression and activity of β-catenin in the thalamus and its projections to the cerebral cortex in the mouse embryo

ENSEMBL ID MGI gene symbol(Full name) Location of recovered clone within gene.
ENSMUSG00000000751 Rpa1 (replication protein A1) Exon 5'UTR
ENSMUSG00000039643 Npm1 (Nucleophosmin 1) Exon ORF
ENSMUSG00000004032 Gstm5 (glutathione S-transferase, Mu 5) Exon 3'UTR
ENSMUSG00000021643 Serf1 (small EDRK-rich factor 1) Exon 3'UTR
ENSMUSG00000028248 Sfrs 18 (serine/arginine-rich splicing factor 18) Exon 3'UTR
ENSMUSG00000003660 Snrnp200 (small nuclear ribonucleoprotein 200 kDa (U5)) Exon 3'UTR
ENSMUSG00000005312 Ubqln1 (Ubiquilin 1) Exon 5'UTR
ENSMUSG00000005873 Reep5 (receptor expression- enhancing protein 5) Exon 5'UTR
ENSMUSG00000006932 Ctnnb1 (β-catenin) Exon 3'UTR
ENSMUSG00000008859 Rala (v-ral simian leukemia viral oncogene homolog A) Exon ORF
ENSMUSG00000027220 Syt13 (Synaptotagmin 13) Exon 3'UTR
ENSMUSG00000028961 Pgd (6-phosphogluconate dehydrogenase) Exon 5'UTR
ENSMUSG00000029580 Actb (β-actin) Exon 5'UTR
ENSMUSG00000030744 Rps3 (Ribosomal protein S3) Exon 5'UTR
ENSMUSG00000036693 Nop14 (NOP14 nucleolar protein homolog (yeast)) Exon ORF
ENSMUSG00000038871 Bgpm (2,3-bisphosphoglycerate mutase) Exon 3'UTR
ENSMUSG00000040225 Bat2l2 (HLA-B associated transcript 2-like 2) Exon ORF
ENSMUSG00000048120 Entpd1 (ectonucleoside triphosphate diphosphohydrolase 1) Exon 3'UTR
ENSMUSG00000021087 Rtn1 (Reticulon 1) Intron 1-2/7 (12989 bp)
ENSMUSG00000024109 Nrxn1 (Neurexin 1α) Intron 9-10/17 (23196 bp)
ENSMUSG00000031536 PolB (DNA polymeraseβ) Intron 10-11/14 (2779 bp)
ENSMUSG00000025609 Mkln1 (muskelin 1), Intron 12-13/18 (11278 bp)
ENSMUSG00000027840 Wnt2b Intron 4-5/5 (3807 bp)
ENSMUSG00000035394 Ccdc11 (Coiled-coil domain containing 11) Intron 7-8/9 (27462 bp)
  1. ENSEMBL identifier, MGI gene symbol and common name or description are given for each mRNA along with whether the sequence recovered from the thalamic axon cDNA library mapped to an exon [broken down into 5' or 3' untranslated region (UTR) or open reading frame (ORF)] or an intron [identified by the flanking exons/total number of exons in that gene and the intron size].