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Table 3 Primers used for validation of stress-responsive genes by RT-qPCR

From: Fluoxetine prevents development of an early stress-related molecular signature in the rat infralimbic medial prefrontal cortex. Implications for depression?

Gene ID

Symbol

Sense (5′-3′)

Antisense (5′-3′)

Amplicon size (bp)

18S ribosomal RNA

Rn18s

CCCGAAGCGTTTACTTTGAA

CCCTCTTAATCATGGCCTCA

136

Glyceraldehyde-3-phosphate dehydrogenase

Gapdh

GAAGGGCTCATGACCACAGT

GGATGCAGGGATGATGTTCT

117

Actin, beta

Actb

CACACTGTGCCCATCTATGA

CCGATCGTGATGACCTGACC

272

Calcium/calmodulin-dependent protein kinase II alpha

Camk2a

GCCTGGACTTTCATCGATTC

GGTACTGAGTGATGCGGATGT

141

Glycogen synthase kinase 3 beta

Gsk3β

GCGAGACACACCTGCCCTCTTC

GTGGCCAGAGGTGGGTTACTTGAC

66

Mammalian target of rapamycin (serine/threonine kinase)

mTOR

TTGGATGTTCCAACCCAAGT

CAGGCCTTGGTTACCAGAAA

106

Neurotrophic tyrosine kinase, receptor, type 2

Ntrk2

TGGAGGGCGACCCACTCATCA

TCAGCTCGG TGGGCGGGTTA

123

Neurotrophic tyrosine kinase, receptor, type 3

Ntrk3

CATCCGCTGGATGCCACCTGAAA

AAGACACGGCCTTGGGTGATGCA

50

Phosphoinositide-3-kinase, catalytic, beta polypeptide

Pik3cb

CCTGCGACAGATGAGTGATG

CAATCCTCCGGTTGTCAAGT

134

V-raf murine sarcoma viral oncogene homolog B1

Braf

CATGGCGACGTGGCAGTGAAAATG

TGAGGTGTGGGTGCTGTCACATTC

50

Glyceraldehyde-3-phosphate dehydrogenase-3-prime

Gapdh-3 ′

GGCTGGCATTGCTCTCAA

GAGGTCCACCACCCTGTTG

88

Glyceraldehyde-3-phosphate dehydrogenase-5-prime

Gapdh-5 ′

GACAGCCGCATCTTCTTG

CACCGACCTTCACCATCTTG

63

Actin, beta-3-prime

Actb-3 ′

CCTAGCACCATGAAGATCAAGA

GCCAGGATAGAGCCACCAATC

77

Actin, beta-5-prime

Actb-5 ′

ACCCAGATCATGTTTGAGACCTT

CAGAGGCATACAGGGACAAC

79