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Table 3 Genes with HDAC3 binding sites in cerebellar granule neurons

From: The Bdnf and Npas4 genes are targets of HDAC3-mediated transcriptional repression

Gene symbolGene detailsDistance to nearest TSSBinding in HK/LK
Nr3c2Nuclear receptor subfamily 3, group C, member 2− 2023HK
Npy2rNeuropeptide Y receptor Y2− 1951HK
Opa3Optic atrophy 3− 1853HK
Neurod2Neuronal differentiation 2− 1583HK
Hes1hes family bHLH transcription factor 1− 1363LK
Npas4Neuronal PAS domain protein 4− 1063HK
Bcl2l10BCL2-like 10 (apoptosis facilitator)− 1051LK
BdnfBrain-derived neurotrophic factor− 1015LK
HrkHarakiri, BCL2 interacting protein− 917LK
FaddFas (TNFRSF6)-associated via death domain− 900HK
NptxrNeuronal pentraxin receptor− 890HK
C1qaComplement component 1, q subcomponent, A chain− 874HK
Nmnat2Nicotinamide nucleotide adenylyltransferase 2− 868HK
BidBH3 interacting domain death agonist− 824LK
Rhebl1Ras homolog enriched in brain like 1− 687LK
Grip1Glutamate receptor interacting protein 1− 375LK
Klf10Kruppel-like factor 10− 362HK
DiabloDiablo, IAP-binding mitochondrial protein− 284LK
Grm4Glutamate receptor, metabotropic 4− 259HK
Npffr1Neuropeptide FF receptor 1− 202LK
Tgfb1Transforming growth factor, beta 1− 112LK
Syngr1Synaptogyrin 1− 87LK
Plxnd1Plexin D1− 45HK
GabarapGABA(A) receptor-associated protein− 31HK
AppAmyloid beta (A4) precursor protein52LK
SnapinSNAP-associated protein58HK
  1. Table lists some of the neuronal genes with HDAC3 binding site in the promoter region. The genes are sorted based on the distance of the binding site from the TSS