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Table 2 ChIP-Seq read analysis

From: The Bdnf and Npas4 genes are targets of HDAC3-mediated transcriptional repression

Sample

Raw read count

Unique read count

Mapped read count

Mapping rate (%)

HK

28,649,979

11,631,206

8,640,236

74

HK_input

25,431,774

20,338,856

15,224,517

75

LK_H3

29,817,952

12,785,551

9,500,783

74

LK_input

14,549,174

11,003,800

5,934,983

54

  1. Table contains the number and percentage of high quality uniquely mapped reads. Reads that were assigned uniquely to the rat genome were used in the analysis