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Table 4 Differential expression within gene ontologies of interest

From: T cell deficiency in spinal cord injury: altered locomotor recovery and whole-genome transcriptional analysis

Identifier Gene ontology Acute Chronic
Genes % Enriched Genes % Enriched
AN (FC >1) SD (FC <1) AN (FC >1) SD (FC <1)
GO:0008219 Cell death 221 39 61 196 57 43
    Type of cell death
GO:0012501       Programmed 202 39 61 179 56 44
GO:0070265       Necrotic 7 86 14 6 83 17
GO:0010941   Regulation of cell death 181 39 61 151 58 42
GO:0010942       Positive    regulation 60 42 58 49 65 35
GO:0060548       Negative    regulation 100 38 62 86 53 47
GO:0070997   Neuron death 47 21 79 37 41 59
GO:1901216       Positive    regulation 11 9 91 5 40 60
GO:1901215       Negative    regulation 28 21 79 26 42 58
  Voltage-gated potassium channel
GO:0005249   Activity 27 4 96 23 4 96
GO:0008076   Complex 22 5 95 15 7 93
GO:0045163   Clustering 1 0 100 0 n/a n/a
  1. FC fold change (AN FKPM divided by SD FKPM)
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