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Table 1 Statistical alignment of the sequencing data from the saline and METH groups

From: Methamphetamine induces alterations in the long non-coding RNAs expression profile in the nucleus accumbens of the mouse

  Saline METH
Total clean reads 49621072 (100%) 50330816 (100%)
Total mapped reads 41689728 (84.02%) 40675732 (80.82%)
Perfect matcha 28650476 (57.74%) 27082591 (53.81%)
≤5 bp mismatchb 13039252 (26.28%) 13593141 (27.01%)
Unique matchc 36764592 (74.09%) 33138073 (65.84%)
Multi-position matchd 4925136 (9.93%) 7537659 (14.98%)
Total unmapped readse 7931344 (15.98%) 9655084 (19.18%)
  1. aindicates clean reads that aligned without mismatch in the total mapped reads.
  2. bindicates clean reads that aligned with fewer than 5 bp mismatches in the total mapped reads.
  3. crepresents the mapped reads that aligned to only one position in the mouse genome.
  4. drepresents the mapped reads that aligned to more than one positions in the mouse genome.
  5. eindicates reads that did not match to the mouse genome.