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Table 1 Statistical alignment of the sequencing data from the saline and METH groups

From: Methamphetamine induces alterations in the long non-coding RNAs expression profile in the nucleus accumbens of the mouse

 

Saline

METH

Total clean reads

49621072 (100%)

50330816 (100%)

Total mapped reads

41689728 (84.02%)

40675732 (80.82%)

Perfect matcha

28650476 (57.74%)

27082591 (53.81%)

≤5 bp mismatchb

13039252 (26.28%)

13593141 (27.01%)

Unique matchc

36764592 (74.09%)

33138073 (65.84%)

Multi-position matchd

4925136 (9.93%)

7537659 (14.98%)

Total unmapped readse

7931344 (15.98%)

9655084 (19.18%)

  1. aindicates clean reads that aligned without mismatch in the total mapped reads.
  2. bindicates clean reads that aligned with fewer than 5 bp mismatches in the total mapped reads.
  3. crepresents the mapped reads that aligned to only one position in the mouse genome.
  4. drepresents the mapped reads that aligned to more than one positions in the mouse genome.
  5. eindicates reads that did not match to the mouse genome.