|
Saline
|
METH
|
---|
Total clean reads
|
49621072 (100%)
|
50330816 (100%)
|
Total mapped reads
|
41689728 (84.02%)
|
40675732 (80.82%)
|
Perfect matcha
|
28650476 (57.74%)
|
27082591 (53.81%)
|
≤5 bp mismatchb
|
13039252 (26.28%)
|
13593141 (27.01%)
|
Unique matchc
|
36764592 (74.09%)
|
33138073 (65.84%)
|
Multi-position matchd
|
4925136 (9.93%)
|
7537659 (14.98%)
|
Total unmapped readse
|
7931344 (15.98%)
|
9655084 (19.18%)
|
-
aindicates clean reads that aligned without mismatch in the total mapped reads.
-
bindicates clean reads that aligned with fewer than 5 bp mismatches in the total mapped reads.
-
crepresents the mapped reads that aligned to only one position in the mouse genome.
-
drepresents the mapped reads that aligned to more than one positions in the mouse genome.
-
eindicates reads that did not match to the mouse genome.