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Table 2 Top 15 differently methylated sites in weight category and the STK33 rs4929949 polymorphism; STK33 category

From: Implication of coronin 7 in body weight regulation in humans, mice and flies

Gene Entrez gene ID Genomic position of the probe/island (hg19) HIL class Genomic location of the closest TSS (hg19) Coefficient Raw p-value Adjusted p-value
REM1 28954 chr20_IC:30062552-30063794 IC 30063104 −0,0931 5,76E-06 0,0324
TERT 7015 chr5_HCshore:1294078–1296099; chr5_ICshore:1292899-1296102 HC 1295161 −0,149 1,03E-05 0,0324
DRD5 1816 chr4:9782881 ICshore 9783257 −0,16 1,13E-05 0,0324
TRPC3 7222 chr4:122853965 HC 122854196 −0,25 1,72E-05 0,0324
FOXD1 2297 chr5:72744904 ICshore 72744351 −0,115 1,84E-05 0,0324
ESPNL 339768 chr2:239008986 IC 239008950 −0,158 1,86E-05 0,0324
ZFYVE9 9372 chr1:52608558 HC 52608045 −0,133 2,37E-05 0,0354
NPY4R 5540 chr10:47083233 IC 47083533 −0,213 3,25E-05 0,0393
PKP1 5317 chr1_HCshore:201252407–201253409; chr1_ICshore:201252275-201253817 HC 201252579 −0,175 4,21E-05 0,0393
FAM118A 55007 chr22:45705265 HC 45705080 −0,279 4,32E-05 0,0393
CEBPE 1053 chr14:23588162 IC 23588819 −0,134 4,47E-05 0,0393
CORO7 79585 chr16:4465731 ICshore 4465897 −0,144 4,50E-05 0,0393
CHST8 64377 chr19:34175481 IC 34175433 −0,145 8,08E-05 0,065
NAA40 79829 chr11:63705946 HC 63706441 0,107 9,22E-05 0,0674
CELSR1 9620 chr22_HCshore:46931364–46934654; chr22_ICshore:46929131-46935234 HC 46933066 −0,205 9,97E-05 0,0674
  1. Abbreviations: high-density CpG island (HC), intermediate-density CpG island (IC), region of intermediate-density CpG island that borders HCs (ICshore).