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Table 5 Regionally enriched genes encoding transcription factors

From: Identification of a set of genes showing regionally enriched expression in the mouse brain

Gene

Transcription Factor Description

Associated Brain Region

Nr2f2

Nuclear receptor subfamily 2, group F, member 2

Amygdala, Basolateral Complex

Gbx1

Gastrulation brain homeobox 1

Basal Nucleus of Meynert

Lhx8

LIM homeobox protein 8

Basal Nucleus of Meynert

Esr1

Estrogen receptor 1

Brainstem (Pons and Medulla)

Pou4f1

POU domain, class 4, transcription factor 1

Brainstem (Pons and Medulla)

Lhx1

LIM homeobox protein 1

Cerebellum, Purkinje Cell Layer

Emx1

Empty spiracles homeobox 1

Cortex

Tbr1

T-box brain gene 1

Cortex

Egr1

Early growth response 1/Zinc finger protein 225

Cortex, Anterior Cingulate

Nr4a2

Nuclear receptor subfamily 4, group A, member 2

Cortex, Insula

Nr3c2

Nuclear receptor subfamily 3, group C, member 2

Hippocampus

Neurod6

Neurogenic differentiation 6; Basic HLH transcription factor

Hippocampus, Ammon's Horn

Dlx1

Distal-less homeobox 1

Neurogenic

Dlx2

Distal-less homeobox 2

Neurogenic

Nr2e1

Nuclear receptor subfamily 2, group E, member 1

Neurogenic

Sox2

SRY (sex determining region Y)-box 2

Neurogenic

Esr2

Estrogen receptor 2

Raphe Nuclei

Foxp1

Forkhead box P1

Striatum

Rarb

Retinoic acid receptor, beta:

Striatum

Pitx3

Paired-like homeodomain transcription factor 3

Substantia Nigra

Lmx1b

LIM homeobox transcription factor 1, beta

Subthalamic Nucleus

Pitx2

Paired-like homeodomain transcription factor 2

Subthalamic Nucleus

Lef1

Lymphoid enhancer binding factor 1

Thalamus

Tcf7l2

Transcription factor 7-like 2 (T-cell specific, HMG-box)

Thalamus

Gcm1

Glial cells missing homolog 1

White Matter – Glia, Astrocytes

Gcm2

Glial cells missing homolog 2

White Matter – Glia, Astrocytes

Olig1

Oligodendrocyte transcription factor 1

White Matter – Glia, Oligodendroglia

Olig2

Oligodendrocyte transcription factor 2

White Matter – Glia, Oligodendroglia

Sox10

SRY (sex determining region Y)-box 10

White Matter – Glia, Oligodendroglia