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Table 3 Sequences of primers and real time PCR probes

From: Molecular characterization and temporal expression profiling of presenilins in the developing porcine brain

Primer and probes

Sequence

Application

PS1 Exon 5 forward primer1

5'-GGAGGTGGTAATGTGGTTGG-3'

BAC sequencing

PS1 Exon 5 reverse primer1

5'-CCAACCATAAGAAGAACTGGG-3'

BAC sequencing

PS1 Exon 7 forward primer1

5'-CCTATAACGTTGCCATGGATTAC-3'

BAC sequencing

PS1 exon 7 reverse primer1

5'-CACAGCCAAGATGAGCCAC-3'

BAC sequencing

PS1 Exon 8 forward primer1

5'-GCTGGTTGAAACAGCTCAGGAG-3'

BAC sequencing

PS1 Exon 8 reverse primer1

5'-CCAGCAAACGAAGTGGGCCATTTG-3'

BAC sequencing

PS1 Exon 9 forward primer1

5'-CAACAATGGTGTGGTTGGTG-3'

BAC sequencing

PS1 Exon 9 reverse primer1

5'-GGATACCTTCCTTTGGGCTTC-3'

BAC sequencing

PS1 Exon 5 forward primer2

5'-GACACTTACCTGGGGCTTTGTG-3'

SNP screening

PS1 Exon 5 reverse primer2

5'-CCAAGTAAGGTGAGACAGGAAAACC-3'

SNP screening

PS1 Exon 7 forward primer2

5'-GCTACGAGTATGAAGGTGGGATATG-3'

SNP screening

PS1 exon 7 reverse primer2

5'-CCAGGAGTCAAGATAACTGG-3'

SNP screening

PS1 Exon 8 forward primer2

5'-CCACCATCTGTTTACCTGCTA-3'

SNP screening

PS1 Exon 8 reverse primer2

5'-GGCCATCATTACATGTGTTTG-3'

SNP screening

PS1 Exon 9 forward primer2

5'-GGTGACATTAAGAAGTTTGGTGACTTG-3'

SNP screening

PS1 Exon 9 reverse primer2

5'-GGGTGTTACCACAGCTTGGAG-3'

SNP screening

PS1 forward primer

5'-GTGATTTCAGTATACGATTTAGTGGCTG-3'

Real Time PCR

PS1 reverse primer

5'-CACCAACCACACCATTGTTGAC-3'

Real Time PCR

PS1 MGB probe

5'-VIC-TTGTGTCCAAATGGC-3'

Real Time PCR

PS2 forward primer

5'-GGAGGAAAGGGGCGTGAAG-3'

Real Time PCR

PS2 reverse primer

5'-CACAAACCGATGAGGATGGC-3'

Real Time PCR

PS2 MGB probe

5'-VIC-CTGGAACACCACGCTGG-3'

Real Time PCR

GAPDH forward primer

5'-GACTCATGACCACGGTCCATG-3'

Real Time PCR

GAPDH reverse primer

5'-GTCAGATCCACAACCGACACG-3'

Real Time PCR

GAPDH MGB probe

5'-VIC-CATCACTGCCACCCAGA-3'

Real Time PCR