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Table 2 Genes at post natal day 15 showing fold change values of ≥2 between Nf1+/- and wild type mice (p ≤ 0.05)

From: Cognitive dysfunction in NFI knock-out mice may result from altered vesicular trafficking of APP/DRD3 complex

Probe Set

Unigene

Fold Change

P Value

Gene Name

Gene Symbol

1425754_a_at

Mm.1420

12.45

0.0354

butyrophilin, subfamily 1, member A1

Btn1a1

1418555_x_at

Mm.21642

6.649

0.00469

Spi-C transcription factor (Spi-1/PU.1 related)

Spic

1420992_at

Mm.10279

6.523

0.00774

ankyrin repeat domain 1 (cardiac muscle)

Ankrd1

1418358_at

Mm.331192

6.182

0.0229

mitochondrial capsule selenoprotein

Mcsp

1458958_at

Mm.209041

6.01

0.00798

neighbor of Punc E11

Nope

1447392_s_at

Mm.276736

5.357

0.0228

carboxypeptidase D

Cpd

1450439_at

Mm.248353

5.224

0.0198

host cell factor C1

Hcfc1

1435410_at

Mm.159608

4.96

0.0419

testicular cell adhesion molecule 1

Tcam1

1454032_at

Mm.126079

4.831

0.0386

neuropilin (NRP) and tolloid (TLL)-like 2

Neto2

1438414_at

Mm.39703

4.337

0.0381

fukutin related protein

Fkrp

1420652_at

Mm.216321

4.245

0.0175

arginine-tRNA-protein transferase 1

Ate1

1425069_at

Mm.264252

4.15

0.00663

similar to nuclear protein, 25 K – mouse

LOC223706

1421515_at

Mm.242728

3.998

0.0161

nuclear receptor subfamily 6, group A, member 1

Nr6a1

1447362_at

Mm.29133

3.983

0.04

budding uninhibited by benzimidazoles 1 homolog, beta

Bub1b

1456697_x_at

Mm.22480

3.814

0.0171

cyclin D binding myb-like transcription factor 1

Dmtf1

1422260_x_at

Mm.14302

3.75

0.0144

chemokine (C-C motif) receptor 5

Ccr5

1420253_at

Mm.201322

3.638

0.0362

dolichol-phosphate (beta-D) mannosyltransferase 1

Dpm1

1427825_at

Mm.272223

3.568

0.0202

solute carrier organic anion transporter family, member 1b2

Slco1b2

1458678_at

Mm.347976

3.356

0.00654

NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1

Ndufab1

1441659_at

Mm.151308

3.305

0.0274

D4, zinc and double PHD fingers, family 3

Dpf3

1417015_at

Mm.41265

3.094

0.0256

Ras association (RalGDS/AF-6) domain family 3

Rassf3

1418536_at

Mm.34421

3.034

0.0147

histocompatibility 2, Q region locus 7

H2-Q7

1437847_x_at

Mm.28275

2.999

0.0357

RNA binding motif protein, X chromosome

Rbmx

1440837_at

Mm.358604

2.771

0.031

histocompatibility 2, O region beta locus

H2-Ob

1418595_at

Mm.12966

2.751

0.041

plasma membrane associated protein, S3-12

S3-12

1422278_at

Mm.327835

2.707

0.00471

dopamine receptor 3

Drd3

1425398_at

Mm.371766

2.539

0.0134

histone 1, H2bc

Hist1h2bc

1425443_at

Mm.244858

2.53

0.0347

transcription factor AP-2, delta

Tcfap2d

1419623_at

Mm.86657

2.515

0.0308

protease, serine, 21

Prss21

1421359_at

Mm.57199

2.51

0.000164

ret proto-oncogene

Ret

1450455_s_at

Mm.89993

2.504

0.00985

aldo-keto reductase family 1, member C12

Akr1c12

1420710_at

Mm.4869

2.422

0.0149

reticuloendotheliosis oncogene

Rel

1434885_at

Mm.155687

2.357

0.0457

DNA segment, Chr 7, ERATO Doi 413, expressed

D7Ertd413e

1451463_at

Mm.291372

2.351

0.0344

Rho GTPase activating protein 8

Arhgap8

1416309_at

Mm.290015

2.299

0.00369

nucleolar and spindle associated protein 1

Nusap1

1425064_at

Mm.250265

2.272

0.00144

aryl hydrocarbon receptor nuclear translocator

Arnt

1425721_at

Mm.221688

2.245

0.0475

pleckstrin homology domain interacting protein

Phip

1421953_at

Mm.21048

2.219

0.0017

v-crk sarcoma virus CT10 oncogene homolog (avian)-like

Crkl

1426520_at

Mm.104932

2.199

0.0211

B-cell translocation gene 4

Btg4

1450104_at

Mm.3037

2.172

0.0339

a disintegrin and metalloprotease domain 10

Adam10

1436008_at

Mm.371590

2.134

0.00836

tumor protein D52

Tpd52

1419535_at

Mm.263706

2.121

0.0243

solute carrier organic anion transporter family, member 6b1

Slco6b1

1420499_at

Mm.10651

2.121

0.0318

GTP cyclohydrolase 1

Gch

1451870_a_at

Mm.253518

2.011

0.0256

bromodomain containing 4

Brd4

1445886_at

Mm.4454

0.497

0.0367

ELK3, member of ETS oncogene family

Elk3

1425690_at

Mm.218788

0.461

0.0463

beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)

B3gat1

1441966_at

Mm.124567

0.452

0.0279

transient receptor potential cation channel, subfamily M, member 3

Trpm3

1427635_at

Mm.30355

0.438

0.0348

kinesin family member 5A

Kif5a

1418194_at

Mm.271670

0.421

0.0445

UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10

Galnt10

1416239_at

Mm.3217

0.42

0.00011

argininosuccinate synthetase 1

Ass1

1449266_at

Mm.131408

0.415

0.0128

methyl CpG binding protein 2

Mecp2

1440072_at

Mm.210787

0.407

0.021

glucocorticoid induced transcript 1

Glcci1

1430357_at

Mm.371563

0.398

0.0139

H3 histone, family 3B

H3f3b

1425707_a_at

Mm.328720

0.387

0.0192

potassium inwardly-rectifying channel, subfamily J, member 6

Kcnj6

1446185_at

Mm.21158

0.353

0.0479

FK506 binding protein 12-rapamycin associated protein 1

Frap1

1422144_at

Mm.3510

0.328

0.0259

inhibin beta E

Inhbe

1421447_at

Mm.303355

0.298

0.000377

one cut domain, family member 1

Onecut1

1449907_at

Mm.174133

0.255

0.0278

beta-carotene 15, 15'-dioxygenase 1

Bcdo1

1421073_a_at

Mm.18509

0.237

0.0359

prostaglandin E receptor 4 (subtype EP4)

Ptger4

1420296_at

Mm.254370

0.232

0.00578

chloride channel 5

Clcn5

1418158_at

Mm.20894

0.205

0.0342

transformation related protein 63

Trp63

1448074_at

Mm.5033

0.174

0.0361

relaxin 1

Rln1

1453630_at

Mm.271953

0.122

0.00471

UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14

Galnt14

1446162_at

Mm.125979

0.0938

0.0101

poly A binding protein, cytoplasmic 5

Pabpc5