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Table 2 Genes that are enriched in the dorsal spinal cord based on microarray analysis.

From: Dorsal horn-enriched genes identified by DNA microarray, in situ hybridization and immunohistochemistry

Description

Accession#

D vs V ratio

Description

Accession#

D vs V ratio

Neuropeptide

  

Calcium calmodulin binding protein

  

Somatostatin**

M25890

11.1–12.4

Vesicle associated calmodulin protein

AI102205

4.60

Protachykinin

X56306

6.45

Neurogranin **

L09119

2.1–4.1

Beta-tachykinin

M15191

5.02

Chromogranin B

AF019974

2.49

Proenkephalin

S49491

4.89

Neural visinin-like protein

D10666

2.42

NPY

M15880

2.44

Secretogranin

M93669

2.35

Neurokinin B

M16410

2.27

Hippocalcin

D12573

2.16

Nociceptin

S79730

2.10

   

CNP

D90219

2.17

Others

  
   

Syntaxin 1A

D10392

2.43

Channel

  

Synuclein-1

AF007758

2.03

Sodium channel SCN6A

AA925248

10.02

Synuclein beta

D17764

2.21

Four repeat ion channel

AF078779

6.92

Neuritin

U88958

2.03

NMDA receptor NR1

S39221

2.48

Neurodap-1

E13644

2.03

K channel Kv 3.1**

X62840

2.2–2.3

GAD

X57573

2.86

   

Proline-rich protein

M20722

2.73

Signaling

  

NSF

AF091834

2.16

Cannabinoid receptor

X55812

2.93

Resiniferatoxin-binding protein

X67877

2.13

GABA-B R2

AF058795

2.79

N-ethylmaleimide sensitive factor

AF089839

2.08

Olfactory receptor (SCR D-9)

AF034899

2.35

Tulip2

AF041107

2.08

G alpha (olf)

S80376

2.63

Neuroendocrine-specific protein

L25633

2.01

Guanine nucleotide releasing factor

X67241

2.21

Dynamin-like protein

AF019043

2.22

CAMK I beta 2

AB004267

2.73

   

CAMKII beta

AA894330

2.15

EST

  

PKC beta

X04139

2.29

EST

AI639036

11.34

   

EST

AI639213

3.13

Transcription factor

  

EST

AI639062

2.88

Zinc finger protein

X54249

2.40

EST

AI639470

2.77

NGFI-A

AF023087

2.21

EST

AI639118

2.50

MRG1

AI014091

2.12

EST

AI072943

2.06

   

EST

AA866291

2.01

  1. Genes that show greater than 2-fold expression in the dorsal spinal cord versus ventral spinal cord with P < 0.05 are listed according to their broad functional categories. The gene expression fold increase for each probeset was calculated as the ratio of means of gene expression index between dorsal and ventral spinal cord. The genes shown to be up-regulated by more than one probeset are indicated with asterisks. The fold increase for these genes is given as a range of fold increase detected by all the probesets for that gene. The genes that were tested by real-time PCR or immunohistochemistry are underlined.