TY - JOUR AU - Robinson, G. E. AU - Fernald, R. D. AU - Clayton, D. F. PY - 2008 DA - 2008// TI - Genes and Social Behavior JO - Science VL - 322 UR - https://doi.org/10.1126/science.1159277 DO - 10.1126/science.1159277 ID - Robinson2008 ER - TY - JOUR AU - Robinson, G. E. AU - Ben-Shahar, Y. PY - 2002 DA - 2002// TI - Social behavior and comparative genomics: new genes or new gene regulation? JO - Genes Brain Behav VL - 1 UR - https://doi.org/10.1034/j.1601-183X.2002.10401.x DO - 10.1034/j.1601-183X.2002.10401.x ID - Robinson2002 ER - TY - JOUR AU - Whitfield, C. W. AU - Cziko, A. M. AU - Robinson, G. E. PY - 2003 DA - 2003// TI - Gene expression profiles in the brain predict behavior in individual honey bees JO - Science VL - 302 UR - https://doi.org/10.1126/science.1086807 DO - 10.1126/science.1086807 ID - Whitfield2003 ER - TY - JOUR AU - Renn, S. C. P. AU - Aubin-Horth, N. AU - Hofmann, H. A. PY - 2008 DA - 2008// TI - Fish and chips: functional genomics of social plasticity in an African cichlid fish JO - J Exp Biol VL - 211 UR - https://doi.org/10.1242/jeb.018242 DO - 10.1242/jeb.018242 ID - Renn2008 ER - TY - BOOK AU - Catchpole, C. K. AU - Slater, P. J. B. PY - 1995 DA - 1995// TI - Bird Song: Biological Themes and Variations PB - Cambridge University Press CY - Cambridge ID - Catchpole1995 ER - TY - JOUR AU - Nottebohm, F. AU - Stokes, T. M. AU - Leonard, C. M. PY - 1976 DA - 1976// TI - Central control of song in the canary JO - J Comp Neurol VL - 165 UR - https://doi.org/10.1002/cne.901650405 DO - 10.1002/cne.901650405 ID - Nottebohm1976 ER - TY - JOUR AU - Aronov, D. AU - Andalman, A. S. AU - Fee, M. S. PY - 2008 DA - 2008// TI - A specialized forebrain circuit for vocal babbling in the juvenile songbird JO - Science VL - 320 UR - https://doi.org/10.1126/science.1155140 DO - 10.1126/science.1155140 ID - Aronov2008 ER - TY - JOUR AU - Hessler, N. A. AU - Doupe, A. J. PY - 1999 DA - 1999// TI - Social context modulates singing-related neural activity in the songbird forebrain JO - Nature Neurosci VL - 2 UR - https://doi.org/10.1038/6306 DO - 10.1038/6306 ID - Hessler1999 ER - TY - JOUR AU - Jarvis, E. D. AU - Scharff, C. AU - Grossman, M. R. AU - Ramos, J. A. AU - Nottebohm, F. PY - 1998 DA - 1998// TI - For whom the bird sings JO - Neuron VL - 4 UR - https://doi.org/10.1016/S0896-6273(00)80594-2 DO - 10.1016/S0896-6273(00)80594-2 ID - Jarvis1998 ER - TY - JOUR AU - Yu, A. C. AU - Margoliash, D. PY - 1996 DA - 1996// TI - Temporal hierarchical control of singing in birds JO - Science VL - 273 UR - https://doi.org/10.1126/science.273.5283.1871 DO - 10.1126/science.273.5283.1871 ID - Yu1996 ER - TY - JOUR AU - Scharff, C. AU - Nottebohm, F. PY - 1991 DA - 1991// TI - A comparative study of the behavioral deficits following lesions of various parts of the zebra finch song system: implications for vocal learning JO - J Neurosci VL - 11 ID - Scharff1991 ER - TY - JOUR AU - Bottjer, S. W. AU - Miesner, E. A. AU - Arnold, A. P. PY - 1984 DA - 1984// TI - Forebrain lesions disrupt development but not maintenance of song in passerine birds JO - Science VL - 224 UR - https://doi.org/10.1126/science.6719123 DO - 10.1126/science.6719123 ID - Bottjer1984 ER - TY - JOUR AU - Nottebohm, F. PY - 1981 DA - 1981// TI - A brain for all seasons: cyclical anatomical changes in song control nuclei of the canary brain JO - Science VL - 214 UR - https://doi.org/10.1126/science.7313697 DO - 10.1126/science.7313697 ID - Nottebohm1981 ER - TY - JOUR AU - Ball, G. F. AU - Auger, C. J. AU - Bernard, D. J. AU - Charlier, T. D. AU - Sartor, J. J. AU - Riters, L. V. AU - Balthazart, J. PY - 2006 DA - 2006// TI - Seasonal plasticity in the song control system: multiple brain sites of steroid hormone action and the importance of variation in song behavior JO - Ann NY Acad Sci VL - 1016 UR - https://doi.org/10.1196/annals.1298.043 DO - 10.1196/annals.1298.043 ID - Ball2006 ER - TY - JOUR AU - Riters, L. V. AU - Eens, M. AU - Pinxten, R. AU - Ball, G. F. PY - 2002 DA - 2002// TI - Seasonal changes in the densities of α2 noradrenergic receptors are inversely related to changes in testosterone and the volumes of song control nuclei in male European starlings JO - J Comp Neurol VL - 444 UR - https://doi.org/10.1002/cne.10131 DO - 10.1002/cne.10131 ID - Riters2002 ER - TY - JOUR AU - Stevenson, T. J. AU - Lynch, K. S. AU - Lamba, P. AU - Ball, G. F. AU - Bernard, D. J. PY - 2009 DA - 2009// TI - Cloning of gonadotropin releasing hormone 1 complementary dans in songbirds facilitates dissection of mechanisms mediating seasonal changes in reproduction JO - Endocrinology VL - 150 UR - https://doi.org/10.1210/en.2008-1435 DO - 10.1210/en.2008-1435 ID - Stevenson2009 ER - TY - JOUR AU - Ball, G. F. AU - Riters, L. V. AU - Balthazart, J. PY - 2002 DA - 2002// TI - Neuroendocrinology of song behavior and avian brain plasticity: multiple sites of action of sex steroid hormones JO - Front Neuroendocrinol VL - 23 UR - https://doi.org/10.1006/frne.2002.0230 DO - 10.1006/frne.2002.0230 ID - Ball2002 ER - TY - JOUR AU - Tramontin, A. D. AU - Brenowitz, E. A. PY - 2000 DA - 2000// TI - Seasonal plasticity in the adult brain JO - Trends Neurosci VL - 23 UR - https://doi.org/10.1016/S0166-2236(00)01558-7 DO - 10.1016/S0166-2236(00)01558-7 ID - Tramontin2000 ER - TY - JOUR AU - Louissaint, A. AU - Rao, S. AU - Leventhal, C. AU - Goldman, S. A. PY - 2002 DA - 2002// TI - Coordinated interaction of neurogenesis and angiogenesis in the adult songbird brain JO - Neuron VL - 34 UR - https://doi.org/10.1016/S0896-6273(02)00722-5 DO - 10.1016/S0896-6273(02)00722-5 ID - Louissaint2002 ER - TY - JOUR AU - Absil, P. AU - Pinxten, R. AU - Balthazart, J. AU - Eens, M. PY - 2003 DA - 2003// TI - Effect of age and testostérone on autumnal neurogenesis in male European starlings (Sturnus vulgaris) JO - Behav Brain Res VL - 143 UR - https://doi.org/10.1016/S0166-4328(03)00006-8 DO - 10.1016/S0166-4328(03)00006-8 ID - Absil2003 ER - TY - JOUR AU - Marler, R. AU - Peters, S. AU - Ball, G. F. AU - Dufty, A. M. AU - Wingfield, J. C. PY - 1988 DA - 1988// TI - The role of sex steroids in the acquisition and production of birdsong JO - Nature VL - 336 UR - https://doi.org/10.1038/336770a0 DO - 10.1038/336770a0 ID - Marler1988 ER - TY - JOUR AU - Nottebohm, F. PY - 1980 DA - 1980// TI - Testosterone triggers growth of brain vocal control nuclei in adult female canaries JO - Brain Res VL - 189 UR - https://doi.org/10.1016/0006-8993(80)90102-X DO - 10.1016/0006-8993(80)90102-X ID - Nottebohm1980 ER - TY - JOUR AU - Replogle, K. AU - Arnold, A. P. AU - Ball, G. F. AU - Band, M. AU - Bensch, S. AU - Brenowitz, E. A. AU - Dong, S. AU - Drnevich, J. AU - Ferris, M. AU - George, J. AU - Gong, G. AU - Hasselquist, D. AU - Hernandez, A. G. AU - Kim, R. AU - Lewin, H. A. AU - Liu, L. AU - Lovell, P. V. AU - Mello, C. V. AU - Naurin, S. AU - Rogriguez-Zas, S. AU - Thimmapuram, J. AU - Wade, J. AU - Clayton, D. F. PY - 2008 DA - 2008// TI - The songbird neurogenomics initiative: community based tools and strategies for study of brain gene function and evolution JO - BMC Genomics VL - 9 UR - https://doi.org/10.1186/1471-2164-9-131 DO - 10.1186/1471-2164-9-131 ID - Replogle2008 ER - TY - JOUR AU - Dawson, A. AU - King, V. M. AU - Bentley, G. E. AU - Ball, G. F. PY - 2001 DA - 2001// TI - Photoperiodic control of seasonality in birds JO - J Biol Rhythms VL - 16 UR - https://doi.org/10.1177/074873001129002079 DO - 10.1177/074873001129002079 ID - Dawson2001 ER - TY - JOUR AU - Lovell, P. V. AU - Clayton, D. R. AU - Replogle, K. L. AU - Mello, C. V. PY - 2008 DA - 2008// TI - Birdsong transcriptomics: neurochemical specializations of the oscine song system JO - PLoS One VL - 3 UR - https://doi.org/10.1371/journal.pone.0003440 DO - 10.1371/journal.pone.0003440 ID - Lovell2008 ER - TY - JOUR AU - Li, X. AU - Wang, X. J. AU - Tannenhauser, J. AU - Podell, S. AU - Mukherjeeet, P. AU - Hertel, M. AU - Biane, J. AU - Masuda, S. AU - Nottebohm, F. AU - Gaasterland, T. PY - 2007 DA - 2007// TI - Genomic resources for songbird research and their use in characterizing gene expression during brain development JO - Proc Natl Acad Sci VL - 104 UR - https://doi.org/10.1073/pnas.0701619104 DO - 10.1073/pnas.0701619104 ID - Li2007 ER - TY - JOUR AU - Wade, J. AU - Camilla, P. AU - Coussens, P. AU - Tempelman, R. J. AU - Clayton, D. F. AU - Lei, L. AU - Arnold, A. P. AU - Agate, R. PY - 2004 DA - 2004// TI - A cDNA microarray from the telencephalon of juvenile male and female zebra finches JO - J Neurosci Methods VL - 138 UR - https://doi.org/10.1016/j.jneumeth.2004.04.007 DO - 10.1016/j.jneumeth.2004.04.007 ID - Wade2004 ER - TY - JOUR AU - Wada, K. AU - Howard, J. T. AU - McConnell, P. AU - Whitney, O. AU - Lints, T. AU - Rivas, M. V. AU - Horita, H. AU - Patterson, M. A. AU - White, S. A. AU - Scharff, C. AU - Haesler, S. AU - Zhao, S. AU - Sakaguchi, H. AU - Hagiwara, M. AU - Shiraki, T. AU - Hirozane-Kishikawa, T. AU - Skene, P. AU - Hayashizaki, Y. AU - Carninci, P. AU - Jarvis, E. D. PY - 2006 DA - 2006// TI - A molecular neuroethological approach for identifying and characterizing a cascade of behaviorally regulated genes JO - Proc Natl Acad. Sci USA VL - 103 UR - https://doi.org/10.1073/pnas.0607098103 DO - 10.1073/pnas.0607098103 ID - Wada2006 ER - TY - JOUR AU - Mukai, M. AU - Replogle, K. AU - Drnevich, J. AU - Wang, G. AU - Wacker, D. AU - Band, M. AU - Clayton, D. F. AU - Wingfield, J. C. PY - 2009 DA - 2009// TI - Seasonal differences of gene expression profiles in song sparrow (Melospiza melodia) hypothalamus in relation to territorial aggression JO - PLoS One VL - 4:12 UR - https://doi.org/10.1371/journal.pone.0008182 DO - 10.1371/journal.pone.0008182 ID - Mukai2009 ER - TY - JOUR AU - London, S. E. AU - Dong, S. AU - Replogle, K. AU - Clayton, D. F. PY - 2009 DA - 2009// TI - Developmental shifts in gene expression in the auditory forebrain during the sensitive period for song learning JO - Dev Neurobiol VL - 69 UR - https://doi.org/10.1002/dneu.20719 DO - 10.1002/dneu.20719 ID - London2009 ER - TY - BOOK PY - 2010 DA - 2010// TI - R: A language and environment for statistical computing PB - R Foundation for Statistical Computing CY - Vienna, Austria ID - ref31 ER - TY - CHAP AU - Smyth GK, L. ED - Gentleman, R. ED - Carey, V. ED - Dudoit, S. ED - Irizarry, R. ED - Huber, W. PY - 2005 DA - 2005// TI - linear models for microarray data BT - Bioinformatics and Computational Biology Solutions using R and Bioconductor PB - Springer CY - New York UR - https://doi.org/10.1007/0-387-29362-0_23 DO - 10.1007/0-387-29362-0_23 ID - Smyth GK2005 ER - TY - JOUR PY - 2004 DA - 2004// TI - Open software development for computational biology and bioinformatics Gentleman et al JO - Genome Biol VL - Vol. 5 UR - https://doi.org/10.1186/gb-2004-5-10-r80 DO - 10.1186/gb-2004-5-10-r80 ID - ref33 ER - TY - JOUR AU - Ritchie, M. E. AU - Silver, J. AU - Oshlack, A. AU - Holmes, M. AU - Diyagama, D. AU - Holloway, A. AU - Smyth, G. K. PY - 2007 DA - 2007// TI - A comparison of background correction methods for two-colour microarrays JO - Bioinformatics VL - 23 UR - https://doi.org/10.1093/bioinformatics/btm412 DO - 10.1093/bioinformatics/btm412 ID - Ritchie2007 ER - TY - JOUR AU - Smyth, G. K. AU - Speed, T. PY - 2003 DA - 2003// TI - Normalization of cDNA microarray data JO - Methods VL - 31 UR - https://doi.org/10.1016/S1046-2023(03)00155-5 DO - 10.1016/S1046-2023(03)00155-5 ID - Smyth2003 ER - TY - JOUR AU - Benjamini, Y. AU - Hochberg, Y. PY - 1995 DA - 1995// TI - Controlling the false discovery rate: a practical and powerful approach to multiple testing JO - J Royal Statistical Society Series B VL - 57 ID - Benjamini1995 ER - TY - JOUR AU - Wu, X. AU - Watson, M. PY - 2009 DA - 2009// TI - M:CORNA: testing gene lists for regulation by microRNAs JO - Bioinformatics VL - 25 UR - https://doi.org/10.1093/bioinformatics/btp059 DO - 10.1093/bioinformatics/btp059 ID - Wu2009 ER - TY - JOUR AU - Riters, L. V. AU - Eens, M. AU - Pinxten, R. AU - Duffy, D. L. AU - Balthazart, J. AU - Ball, G. F. PY - 2000 DA - 2000// TI - Seasonal changes in courtship song and the medial preoptic area in male European starlings (Sturnus vulgaris) JO - Horm Behav VL - 38 UR - https://doi.org/10.1006/hbeh.2000.1623 DO - 10.1006/hbeh.2000.1623 ID - Riters2000 ER - TY - JOUR AU - Vicario, D. S. PY - 1991 DA - 1991// TI - Organization of the zebra finch song control system: II. Functional organization of outputs from nucleus robustus archistriatalis JO - J Comp. Neurobiol VL - 2 UR - https://doi.org/10.1002/neu.480220107 DO - 10.1002/neu.480220107 ID - Vicario1991 ER - TY - JOUR AU - Margoliash, D. PY - 1997 DA - 1997// TI - Functional organization of forebrain pathways for song production and perception JO - J Neurobiol VL - 33 UR - https://doi.org/3.0.CO;2-C DO - 3.0.CO;2-C ID - Margoliash1997 ER - TY - CHAP AU - Ball, G. F. AU - Balthazart, J. ED - Pfaff, D. W. PY - 2002 DA - 2002// TI - Neuroendocrine mechanisms regulating reproductive cycles and reproductive behavior in birds BT - Hormones, Brain and Behavior PB - Academic Press CY - San Diego UR - https://doi.org/10.1016/B978-012532104-4/50034-2 DO - 10.1016/B978-012532104-4/50034-2 ID - Ball2002 ER - TY - JOUR AU - Jarvis, E. D. AU - Nottebohm, F. PY - 1997 DA - 1997// TI - Motor-driven gene expression JO - Proc Natl Acad Sci USA VL - 94 UR - https://doi.org/10.1073/pnas.94.8.4097 DO - 10.1073/pnas.94.8.4097 ID - Jarvis1997 ER - TY - JOUR AU - Stevenson, T. J. AU - Ball, G. F. PY - 2011 DA - 2011// TI - information theory and the neuropeptidergic regulation of seasonal reproduction in mammals and birds JO - Proc Biol Sci Lond VL - 278 UR - https://doi.org/10.1098/rspb.2010.2181 DO - 10.1098/rspb.2010.2181 ID - Stevenson2011 ER - TY - JOUR AU - Ubuka, T. AU - Cadigan, P. A. AU - Wang, A. AU - Liu, J. AU - Bentley, G. E. PY - 2009 DA - 2009// TI - Identification of European starling GnRH1 precursor mRNA and its seasonal regulation JO - Gen Comp Endocrinol VL - 162 UR - https://doi.org/10.1016/j.ygcen.2009.04.001 DO - 10.1016/j.ygcen.2009.04.001 ID - Ubuka2009 ER - TY - JOUR AU - Yamamura, T. AU - Hirunagi, K. AU - Ebihara, S. AU - Yoshimura, T. PY - 2004 DA - 2004// TI - Seasonal morphological changes in the neuro-glial interaction between gonadotropin-releasing hormone nerve terminals and glial endfeet in Japanese quail JO - Endocrinol VL - 145 UR - https://doi.org/10.1210/en.2004-0366 DO - 10.1210/en.2004-0366 ID - Yamamura2004 ER - TY - JOUR AU - Yoshimura, T. AU - Yasuo, S. AU - Watanbe, M. AU - Iigo, M. AU - Yamamura, T. AU - Hirunagi, K. AU - Ebihara, S. PY - 2003 DA - 2003// TI - Light-induced hormone conversion of T4 to T3 regulates photoperiodic response of gonads in birds JO - Nature VL - 426 UR - https://doi.org/10.1038/nature02117 DO - 10.1038/nature02117 ID - Yoshimura2003 ER - TY - JOUR AU - Nakao, N. AU - Ono, H. AU - Yamamura, T. AU - Anraku, T. AU - Takagi, T. AU - Higashi, K. AU - Yasuo, S. AU - Katou, Y. AU - Kageyama, S. AU - Uno, Y. AU - Kasukawa, T. AU - Iigo, M. AU - Sharp, P. J. AU - Iwasawa, A. AU - Suzuki, Y. AU - Sugano, S. AU - Niimi, T. AU - Mizutani, M. AU - Namikawa, T. AU - Ebihara, S. AU - Ueda, H. R. AU - Yoshimura, T. PY - 2008 DA - 2008// TI - Thyrotrophin in the pars tuberalis triggers photoperiodic response JO - Nature VL - 452 UR - https://doi.org/10.1038/nature06738 DO - 10.1038/nature06738 ID - Nakao2008 ER - TY - JOUR AU - Konishi, M. AU - Emlen, S. T. AU - Ricklefs, R. E. AU - Wingfield, J. C. PY - 1989 DA - 1989// TI - Contributions of bird studies to biology JO - Science VL - 246 UR - https://doi.org/10.1126/science.2683069 DO - 10.1126/science.2683069 ID - Konishi1989 ER - TY - JOUR AU - Warren, W. C. AU - Clayton, D. F. AU - Ellegren, H. AU - Arnold, A. P. AU - Hillier, L. W. AU - Künstner, A. AU - Searle, S. AU - White, S. AU - Vilella, A. J. AU - Fairley, S. AU - Heger, A. AU - Kong, L. AU - Ponting, C. P. AU - Jarvis, E. D. AU - Mello, C. V. AU - Minx, P. AU - Lovell, P. AU - Velho, T. A. AU - Ferris, M. AU - Balakrishnan, C. N. AU - Sinha, S. AU - Blatti, C. AU - London, S. E. AU - Li, Y. AU - Lin, Y. C. AU - George, J. AU - Sweedler, J. AU - Southey, B. AU - Gunaratne, P. AU - Watson, M. PY - 2010 DA - 2010// TI - The genome of a songbird JO - Nature VL - 464 UR - https://doi.org/10.1038/nature08819 DO - 10.1038/nature08819 ID - Warren2010 ER -