Table 1 Size and boundary nucleotide sequences of exons and introns of the porcine Dab1 and Fyn genes
From: Identification of alternatively spliced Dab1 and Fyn isoforms in pig
Dab1 | ||||
|---|---|---|---|---|
Exon number | Exon (nt) | 5' junction | Intron (nt) | 3' junction |
2 (from start codon) | 67 | AGAAAG... | ? | ...agGTCAGG |
3 | 140 | CTCAAGgt... | 7978 | ...agGGCGTT |
4 | 99 | ACAGGGgt... | 67718 | ...agGCTCTT |
5 | 132 | CAGGCGgt... | 583 | ...agGCTGAA |
6 | 120 | TATCAGgt... | 456 | ...agACAATT |
7 (exists in sDab1) | 39 | TACCAGgt... | 1561 | ...agTACATT |
8 (exists in sDab1) | 66 | TATCAGgt... | 7729 | ...agGTTCCC |
9 | 60 | GTAAGTgt... | 28324 | ...agAACGGC |
10 (exists in sDab1-Li) | 51 | ACGCCGgt... | 92 | ...agAACAGA |
11 (exists in sDab1-Li) | 48 | ACAAAGgt... | 4910 | ...agGCTGTG |
12 | 63 | CCCCCCgt... | 2345 | ...agACTCCT |
13 | 109 | CCTCAGgt... | 8585 | ...agGTTATG |
14 | 549 | ACTCACgt... | 4646 | ...agCTCCCA |
15 | 128 | GAAGCCgt... | 347 | ...agCCTGAT |
16 (stop codon of sDab1) | 111 | GTCTGGgt... | 13941 | ...agGAGCTG |
17 (stop codon of sDab1-Li) | 45 | Â | Â | Â |
Fyn | ||||
Exon number | Exon (nt) | 5' junction | Intron (nt) | 3' junction |
2 (from start codon) | 247 | GAACAGgt... | 3850 | ...agGAGTGA |
3 | 97 | CAGCTCgt... | 7851 | ...agGGAAGG |
4 | 99 | AGAAGAgt... | 3193 | ...agGTGGTA |
5 | 104 | CCAAAGgt... | 976 | ...agGTGCCT |
6 | 150 | ACTCAGgt... | 3179 | ...tcAGAGAG |
7 (exists in sFyn-B) | 165 | GGATGGgt... | 527 | ...agAGAAAG |
8 (exists in sFyn-T) | 156 | GGCTTGgt... | 3094 | ...agGTACCT |
9 | 180 | ATAAAGgt... | 1547 | ...agGAAGCT |
10 | 77 | GCACAGgt... | 90 | ...agGTTGCT |
11 | 154 | GACAAGgt... | 19971 | ...agGTGCAA |
12 | 133 | ACCCAGgt... | 10569 | ...agGCATGA |
13 (till stop codon) | 209 | Â | Â | Â |