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Table 3 Qualitative listing of PWM predictions compiled from CYP19 and HSD17B4 genes.

From: Genomic and neural analysis of the estradiol-synthetic pathway in the zebra finch

 

CYP19

HSD17B4

CYP19

HSD17B4

 

CYP19

HSD17B4

CYP19

HSD17B4

Ar

    

NFYA

 

â– 

â–¡

â–¡

Arnt

 

â– 

 

â–¡

NHLH1

 

â– 

 

â–¡

Arnt-Ahr

 

â– 

â–¡

â–¡

Nkx2-5

  

â–¡

â–¡

Bapx1

  

â–¡

â–¡

NKX3-1

  

â–¡

 

cEBP

  

â–¡

â–¡

Nobox

   

â–¡

CREB1

  

â–¡

â–¡

NR1H2-RXR

â– 

 

â–¡

â–¡

Ddit3-Cebpa

â– 

 

â–¡

â–¡

NR2F1

   

â–¡

E2F1

 

â– 

 

â–¡

NR3C1

  

â–¡

â–¡

ELF5

   

â–¡

Pax2

   

â–¡

ELK1

 

â– 

 

â–¡

Pax4

  

â–¡

â–¡

En1

  

â–¡

â–¡

Pax5

 

â– 

 

â–¡

ESR1

  

â–¡

â–¡

Pax6

  

â–¡

â–¡

ETS1

 

â– 

â–¡

â–¡

Pbx

  

â–¡

â–¡

Evi1

  

â–¡

â–¡

Pdx1

  

â–¡

â–¡

Fos

   

â–¡

PPARG

  

â–¡

â–¡

Foxa2

   

â–¡

PPARG-RXRA

â– 

 

â–¡

â–¡

FOXC1

   

â–¡

Prrx2

  

â–¡

â–¡

Foxd3

    

REL

  

â–¡

â–¡

FOXF2

â– 

 

â–¡

â–¡

RELA

  

â–¡

 

FOXI1

  

â–¡

â–¡

REST

â– 

 

â–¡

 

FOXL1

  

â–¡

â–¡

Roaz

 

â– 

â–¡

â–¡

Foxq1

  

â–¡

â–¡

RORA_1

 

â– 

â–¡

â–¡

GABPA

 

â– 

â–¡

â–¡

RORA_2

 

â– 

 

â–¡

Gata1

  

â–¡

â–¡

RORA1

 

â– 

  

GATA2

  

â–¡

â–¡

RREB1

   

â–¡

GATA3

  

â–¡

â–¡

RUNX1

â– 

 

â–¡

â–¡

Gfi

  

â–¡

â–¡

RUSH1-alfa

  

â–¡

HAND1-TCF3

 

â–¡

â–¡

RXRA-VDR

â– 

 

â–¡

â–¡

HLF

   

â–¡

RXR-VDR

â– 

 

â–¡

â–¡

HNF1A

   

â–¡

Sox17

   

â–¡

HNF4

 

â– 

  

Sox5

  

â–¡

 

Hox11-CTF1

  

â–¡

SOX9

  

â–¡

â–¡

IRF1

â– 

 

â–¡

â–¡

SP1

 

â– 

 

â–¡

IRF2

   

â–¡

SPI1

   

â–¡

Klf4

   

â–¡

SPIB

 

â– 

 

â–¡

Lhx3

â– 

 

â–¡

â–¡

Spz1

â– 

 

â–¡

â–¡

MafB

 

â– 

 

â–¡

SRF

â– 

 

â–¡

â–¡

MAX

    

SRY

  

â–¡

â–¡

MEF2A

  

â–¡

 

Staf

    

MIZF

 

â– 

  

STAT1

  

â–¡

â–¡

Myb

 

â– 

â–¡

â–¡

T

  

â–¡

â–¡

MYC-MAX

    

TAL1-TCF3

 

â–¡

â–¡

Mycn

 

â– 

  

TBP

 

â– 

â–¡

â–¡

Myf

   

â–¡

TCF1

   

â–¡

MZF1_1-4

 

â– 

 

â–¡

TEAD

    

MZF1_5-13

 

â– 

 

â–¡

TFAP2A

 

â– 

 

â–¡

NFIL3

  

â–¡

â–¡

TP53

    

NF-kappaB

 

â– 

  

USF1

â– 

â– 

â–¡

 

NFKB1

    

YY1

â– 

 

â–¡

â–¡

NF-Y

 

â– 

â–¡

â–¡

ZEB1

    
     

ZNF42_1-4

â– 

 

â–¡

  1. All 101 JASPAR predictions mapped onto the zebra finch genome assembly are listed. Blocks in the row denote the presence of the PWM either in the 5'-focused region (filled in blocks) or across the entire gene territory (open blocks) for CYP19 and HSD17B4.