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Table 2 Qualitative listing of PWM predictions compiled from StAR and TSPO genes.

From: Genomic and neural analysis of the estradiol-synthetic pathway in the zebra finch

  StAR TSPO StAR TSPO   StAR TSPO StAR TSPO
Ar      NFYA     
Arnt      NHLH1    
Arnt-Ahr    Nkx2-5     
Bapx1    NKX3-1   
cEBP    Nobox    
CREB1     NR1H2-RXR     
Ddit3-Cebpa   NR2F1     
E2F1      NR3C1   
ELF5      Pax2     
ELK1      Pax4     
En1      Pax5    
ESR1    Pax6    
ETS1    Pbx     
Evi1      Pdx1    
Fos     PPARG    
Foxa2      PPARG-RXRA    
FOXC1      Prrx2    
Foxd3      REL     
FOXF2    RELA   
FOXI1      REST   
FOXL1      Roaz   
Foxq1      RORA_1     
GABPA     RORA_2     
Gata1      RORA1     
GATA2      RREB1   
GATA3      RUNX1   
Gfi      RUSH1-alfa     
HAND1-TCF3   RXRA-VDR     
HLF      RXR-VDR     
HNF1A      Sox17   
HNF4      Sox5    
Hox11-CTF1      SOX9     
IRF1   SP1   
IRF2      SPI1     
Klf4    SPIB   
Lhx3   Spz1     
MafB    SRF     
MAX      SRY     
MEF2A      Staf    
MIZF      STAT1     
Myb      T     
MYC-MAX      TAL1-TCF3     
Mycn      TBP     
Myf     TCF1     
MZF1_1-4    TEAD   
MZF1_5-13    TFAP2A    
NFIL3      TP53  
NF-kappaB     USF1     
NFKB1     YY1     
NF-Y      ZEB1    
      ZNF42_1-4   
  1. All 101 JASPAR PWMs that were mapped onto the zebra finch genome assembly are listed. Blocks in the row denote the presence of the PWM either in the 5'-focused region (filled in blocks) or across the entire gene territory (open blocks) for StAR and TSPO.