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Table 2 60 mRNAs encoding transcription factors are up-regulated in neuronal progenitors between E11 and E13.

From: Integrating microRNA and mRNA expression profiles of neuronal progenitors to identify regulatory networks underlying the onset of cortical neurogenesis

Affymetrix ID

FoldΔ

GenBank

Gene

Gene Description

1379530_at

48.3

AA964658

 

Eomesodermin

1392064_at

30.2

BF400590

Dlx1

distal-less homeobox 1 (predicted)

1383010_at

19.1

AW531880

 

B-cell CLL/lymphoma 11A (zinc finger protein) (predicted)

1377171_at

10.9

AA875041

Lzts1

leucine zipper, putative tumor suppressor 1

1391948_at

9.8

BM390227

Bcl11b

B-cell leukemia/lymphoma 11B (predicted)

1381350_at

9.8

AI317824

 

Transcribed locus

1387288_at

9.5

NM_019218

Neurod1

neurogenic differentiation 1

1369679_a_at

9.2

AB060652

Nfia

nuclear factor I/A

1378776_at

6.8

BE097103

Pou6f1

POU domain, class 6, transcription factor 1

1374625_at

6.6

AI176616

Hes6

hairy and enhancer of split 6 (Drosophila) (predicted)

1394022_at

6.2

BE116009

Idb4

inhibitor of DNA binding 4

1371570_at

6.0

AI406266

Scrt1

scratch homolog 1, zinc finger protein (predicted)

1380552_at

6.0

AI555855

 

Transcribed locus

1374187_at

5.9

AI233361

 

Transcribed locus

1371202_a_at

5.9

AB012232

Nfib

nuclear factor I/B

1383937_at

5.6

BI284495

 

transcription factor AP-2, gamma

1367946_at

4.7

NM_017365

Pdlim1

PDZ and LIM domain 1 (elfin)

1379674_at

4.5

BE115481

Cbfa2t3

core-binding factor, alpha subunit 2;3 (predicted)

1371043_a_at

3.9

BE107327

Pou3f3

POU domain, class 3, transcription factor 3

1383573_at

3.9

BE117444

 

Serologically defined colon cancer antigen 33 (predicted)

1377206_at

3.6

BI282093

Lhx1

LIM homeobox protein 1

1387349_at

3.4

NM_013028

Shox2

short stature homeobox 2

1369765_at

3.3

NM_022384

Ascl1

achaete-scute complex homolog-like 1 (Drosophila)

1388185_at

3.2

AI178012

Rb1

retinoblastoma 1

1370946_at

3.2

BF420722

Nfix

nuclear factor I/X

1370963_at

3.2

AJ131902

Gas7

growth arrest specific 7

1385173_at

3.1

BE116944

Ebf3

early B-cell factor 3 (predicted)

1370694_at

3.1

AB020967

Trib3

tribbles homolog 3 (Drosophila)

1378859_at

3.0

AI058446

 

aristaless 3

1372299_at

3.0

AI013919

Cdkn1c

cyclin-dependent kinase inhibitor 1C (P57)

1371024_at

3.0

AW527515

Cutl1

cut-like 1 (Drosophila)

1398548_at

2.9

BF389746

Nr6a1

Nuclear receptor subfamily 6, group A, member 1

1371034_at

2.9

BF396189

Onecut1

one cut domain, family member 1

1387122_at

2.9

NM_012760

Plagl1

pleiomorphic adenoma gene-like 1

1378487_at

2.7

BF403191

Ep300

E1A binding protein p300

1384840_at

2.7

AA924754

Prrx1

Paired related homeobox 1

1395161_at

2.7

AW531604

Myt1

myelin transcription factor 1 (predicted)

1387200_at

2.6

NM_021770

Olig1

oligodendrocyte transcription factor 1

1392089_at

2.6

AW435314

Hcfc2

host cell factor C2 (predicted)

1392477_at

2.6

AI059914

Etv1

ets variant gene 1 (predicted)

1388701_at

2.5

AI555336

 

mixed lineage-leukemia translocation to 6 homolog

1372274_at

2.5

AI009727

 

mixed-lineage leukemia 5 (trithorax homolog)

1383247_a_at

2.5

BI291029

Mybbp1a

MYB binding protein (P160) 1a

1387274_at

2.5

NM_012943

Dlx5

distal-less homeobox 5

1372093_at

2.5

AI409308

Mxi1

Max interacting protein 1

1383736_at

2.4

AI145457

Elavl2

ELAV (embryonic lethal, abnormal vision)

1397779_at

2.4

BF562254

 

Chromodomain helicase DNA binding protein 2 (predicted)

1383166_at

2.4

BE100595

 

Transcribed locus

1380363_at

2.4

BF420490

Klf7

Kruppel-like factor 7 (ubiquitous) (predicted)

1386080_at

2.4

BE107815

Hey1

Hairy/enhancer-of-split related with YRPW motif 1

1385227_at

2.4

BF398245

Trps1

trichorhinophalangeal syndrome I (predicted)

1385215_at

2.3

BF388857

Cbfa2t1

core-binding factor, runt domain, alpha subunit 2

1372319_at

2.3

BF282811

 

Transcribed locus, strongly similar to XP_230811.3

1392676_at

2.2

AI548984

 

myocardial ischemic preconditioning upregulated 1

1370535_at

2.2

U48809

Myt1l

myelin transcription factor 1-like

1397734_at

2.2

AW524780

 

Sp3 transcription factor

1368841_at

2.1

NM_053369

Tcf4

transcription factor 4

1373256_at

2.1

BM391119

Chd3

Chromodomain helicase DNA binding protein 3 (predicted)

1389994_at

2.1

BE104268

Sox11

SRY-box containing gene 11

1381489_at

2.1

BE114007

Sox6

SRY-box containing gene 6 (predicted)